TriticeaeSSRdb: The Triticeae Simple Sequence Repeat Database
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Akashinriki
B1K-04-12
Barke
Golden_Promise
Hockett
HOR 10350
HOR 13821
HOR 13942
HOR 21599
HOR_3081
HOR 3365
HOR 7552
HOR 8148
HOR 9043
Igri
MorexV2
OUN333
RGT Planet
ZDM01467
ZDM02064
Species
Aegilops bicornis
Aegilops longissima
Aegilops searsii
Aegilops sharonensis
Aegilops speltoides
Aegilops tauschii
Aegilops umbellulata
Dasypyrum villosum
Hordeum marinum
Hordeum spontaneum
Hordeum vulgare
Hordeum vulgare
var.
nudum
Leymus chinensis
Thinopyrum elongatum
Triticum aestivum
Triticum aestivum
ssp.
tibetanum
Shao
Triticum dicoccoides
Triticum monococcum
Triticum spelta
Triticum turgidum
Triticum urartu
Tools
Blast
SSR Prediction(MISA)
SSR Prediction(Pytrf)
JBrowse
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Triticeae SSR Database
Home
Species
Aegilops bicornis
Aegilops longissima
Aegilops searsii
Aegilops sharonensis
Aegilops speltoides
Aegilops tauschii
Aegilops umbellulata
Dasypyrum villosum
Hordeum marinum
Hordeum spontaneum
Hordeum vulgare
Hordeum vulgare var. nudum
Leymus chinensis
Thinopyrum elongatum
Triticum aestivum
Triticum aestivum ssp. tibetanum Shao
Triticum dicoccoides
Triticum monococcum
Triticum spelta
Triticum turgidum
Triticum urartu
Tools
Blast
SSR Prediction(MISA)
SSR Prediction(Pytrf)
JBrowse
Help
Download
Contact
6
Distribution of SSR motif types
The most abundant motif category
HOR 10350
HOR 3801 is a barley cultivar developed in Hungary, recognized for its agronomic traits and used in research to study disease resistance and other key barley characteristics.
Species:
HOR 10350
Ploidy:
diploid
Chromosomes:
14
Genomic SSRs:
125,883
Genic SSRs:
3,813,572
Genome size:
4.05G
Assembly:
-
Genome URL:
HOR 10350
Genome URL
Accession:
-
Region
Intergenic
Genic
Chromosomes (Multi select)
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clear
chr1H
chr2H
chr3H
chr4H
chr5H
chr6H
chr7H
chrUn
Microsatellite Characterstics (select any one)
Motify Type
Repeat Motif Type
All
Mono
Di
Tri
Tetra
Penta
Hexa
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Chromosome Location range(kbp)
Size of SSR(bp)
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Reference