TriticeaeSSRdb: The Triticeae Simple Sequence Repeat Database
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Species
Aegilops bicornis
Aegilops longissima
Aegilops searsii
Aegilops sharonensis
Aegilops speltoides
Aegilops tauschii
Aegilops umbellulata
Dasypyrum villosum
Hordeum marinum
Hordeum spontaneum
Hordeum vulgare
Hordeum vulgare
var.
nudum
Leymus chinensis
Thinopyrum elongatum
Triticum aestivum
Triticum aestivum
ssp.
tibetanum
Shao
Triticum dicoccoides
Triticum monococcum
Triticum spelta
Triticum turgidum
Triticum urartu
Tools
Blast
SSR Prediction(MISA)
SSR Prediction(Pytrf)
Help
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Triticeae SSR Database
Home
Species
Aegilops bicornis
Aegilops longissima
Aegilops searsii
Aegilops sharonensis
Aegilops speltoides
Aegilops tauschii
Aegilops umbellulata
Dasypyrum villosum
Hordeum marinum
Hordeum spontaneum
Hordeum vulgare
Hordeum vulgare var. nudum
Leymus chinensis
Thinopyrum elongatum
Triticum aestivum
Triticum aestivum ssp. tibetanum Shao
Triticum dicoccoides
Triticum monococcum
Triticum spelta
Triticum turgidum
Triticum urartu
Tools
Blast
SSR Prediction(MISA)
SSR Prediction(Pytrf)
Help
Download
Contact
SSR Loci Related Information Download
Species:
Aegilops bicornis
Aegilops longissima
Aegilops searsii
Aegilops sharonensis
Aegilops speltoides
Aegilops tauschii
Aegilops umbellulata
Dasypyrum villosum
Hordeum marinum
Hordeum spontaneum
Hordeum vulgare
Hordeum vulgare
var.
nudum
Leymus chinensis
Thinopyrum elongatum
Triticum aestivum
Triticum aestivum
ssp.
tibetanum
Shao
Triticum dicoccoides
Triticum monococcum
Triticum spelta
Triticum turgidum
Triticum urartu
Type:
SSR locus information
SSR locus information of gene region
SSR locus information of intergenic region
Annotation information of SSR loci
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Supplementary Table Download
Supplementary Table 1. Genomic data of different
Triticeae
species used in the study.
Supplementary Table 2. Numbers and densities of SSR loci identified in 21
Triticeae
genomes.
Supplementary Table 3. Relative frequency of SSR motifs with different lengths, classified by the number of repeats.
Supplementary Table 4. Distribution of motif types in
Triticeae
species.
Supplementary Table 5. Top 5 most abundant motif categories across the 21
Triticeae
genomes.
Supplementary Table 6. Distribution of SSR loci on different chromosomes in 21
Triticeae
species.
Supplementary Table 7. Frequencies and polymorphism of SSRs across genomic regions in 21
Triticeae
genomes.
Supplementary Table 8. GO enrichment analysis of SSR-containing genes in
H. vulgare
.